Instrumentation · Methods · Prototyping
Good science requires good tools. When the right instrument doesn't exist, I build it — from laser-timed performance chambers to thermal preference arenas to 3D-printed research devices. This page documents the hardware and methods I've developed for measuring fish performance at scale.
Designing and building bespoke measurement systems when off-the-shelf solutions are too slow, too expensive, or simply don't exist for the biological questions at hand.
Standardizing and validating new protocols for quantifying fish performance — from burst swimming and thermal preference to respirometry approaches for fragile or endangered species.
Using rapid prototyping and 3D printing to iterate on research device design — building functional prototypes for respirometry chambers, swim tunnels, and behavioral arenas.
Instruments and protocols developed to measure fish performance at scale
Manuscript In Review
Burst swimming — the explosive, anaerobic sprint used for predator escape and prey capture — is one of the most ecologically relevant performance traits in fish, but historically difficult to measure with precision and throughput. I designed and built a Raspberry Pi–powered swimming tunnel instrumented with laser break-beam sensors that automatically times multiple burst performance metrics with millisecond precision.
The system can process dozens of fish per day, across temperatures and species, and has already been applied to study predator–prey thermal dynamics in Chinook salmon (McInturf et al. 2022).
Manuscript In Review
Understanding where fish choose to be — not just where they can survive — is critical for predicting habitat use under warming. This thermal preference arena creates a stable thermal gradient within a single tank, allowing fish to behaviorally thermoregulate and reveal their preferred temperatures through movement and position.
Developed and deployed at McMurdo Station, Antarctica to characterize thermal preferences in Trematomus bernacchii and T. pennellii — revealing behavioral evidence of niche differentiation between sympatric species that was not apparent from physiology alone (Naslund et al., in review).
In Development
Continuous, high-resolution temperature data from rivers and experimental systems is foundational to ecophysiological research — but commercial solutions are often expensive, proprietary, or poorly suited to the spatial and temporal resolution needed for physiological studies.
This ongoing project develops low-cost, open-source temperature logging hardware and software for deployment in both laboratory systems and field environments. Designed to integrate directly with the physiological performance frameworks used across my research program.
Designing research equipment from scratch is a slow, expensive process when relying on machine shops and off-the-shelf components. 3D printing and rapid prototyping have transformed my ability to iterate on device design — from the geometry of respirometry chambers to custom mounts, flow straighteners, and behavioral arena components.
I use CAD modeling and FDM printing to develop and test functional prototypes before committing to final fabrication, dramatically shortening the design cycle and reducing cost. Several devices developed through this process are now in regular use across multiple labs.
If you're working on a similar instrumentation challenge and want to collaborate or license a device design, I'd love to hear from you.
Get in touch →If you're working on a related instrumentation challenge, need a custom performance measurement solution, or want to discuss licensing or adapting one of these devices for your own research program — get in touch.
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